STRINGSTRING
AEF24266.1 AEF24266.1 thrB thrB AEF22068.1 AEF22068.1 AEF22262.1 AEF22262.1 AEF22263.1 AEF22263.1 polA polA AEF21954.1 AEF21954.1 AEF23076.1 AEF23076.1 AEF23436.1 AEF23436.1 AEF24268.1 AEF24268.1 AEF21958.1 AEF21958.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF24266.1KEGG: pmy:Pmen_0153 hypothetical protein. (94 aa)    
Predicted Functional Partners:
thrB
TIGRFAM: Homoserine kinase ThrB; KEGG: pmy:Pmen_0152 homoserine kinase; PFAM: Aminoglycoside phosphotransferase; Belongs to the pseudomonas-type ThrB family.
  
    0.863
AEF22068.1
KEGG: pmy:Pmen_2589 hypothetical protein.
  
    0.785
AEF22262.1
PFAM: Peptidase M4, propeptide, PepSY; KEGG: nve:NEMVE_v1g225547 hypothetical protein.
  
    0.785
AEF22263.1
PFAM: Peptidase M4, propeptide, PepSY; KEGG: pag:PLES_24461 putative lipoprotein.
  
    0.785
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.647
AEF21954.1
yecA family protein; TIGRFAM: Uncharacterised protein family UPF0149; KEGG: pmy:Pmen_1811 YecA family protein; Belongs to the UPF0149 family.
  
     0.553
AEF23076.1
PFAM: Type IV pilus assembly PilZ; KEGG: pap:PSPA7_1777 type IV pilus assembly protein PilZ.
  
     0.542
AEF23436.1
KEGG: pmy:Pmen_3068 hypothetical protein.
  
     0.522
AEF24268.1
PFAM: SNARE associated Golgi protein; KEGG: ote:Oter_1776 SNARE associated Golgi protein.
       0.455
AEF21958.1
Motility protein FimV; KEGG: pmy:Pmen_1815 peptidoglycan-binding LysM; TIGRFAM: Motility protein FimV, C-terminal; Motility protein FimV, N-terminal; PFAM: Peptidoglycan-binding lysin domain.
  
    0.453
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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