STRINGSTRING
AEF24322.1 AEF24322.1 AEF24323.1 AEF24323.1 AEF24321.1 AEF24321.1 AEF24326.1 AEF24326.1 AEF24324.1 AEF24324.1 AEF24325.1 AEF24325.1 AEF24320.1 AEF24320.1 AEF20228.1 AEF20228.1 AEF20241.1 AEF20241.1 AEF20242.1 AEF20242.1 AEF20230.1 AEF20230.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AEF24322.1PFAM: Protein of unknown function DUF2169; KEGG: pau:PA14_01180 hypothetical protein. (370 aa)    
Predicted Functional Partners:
AEF24323.1
KEGG: pmy:Pmen_2335 3-oxoacyl-(acyl carrier protein) synthase.
 
  
 0.982
AEF24321.1
KEGG: pag:PLES_00971 hypothetical protein.
 
  
 0.981
AEF24326.1
TIGRFAM: Conserved hypothetical protein CHP02270; KEGG: pmy:Pmen_2338 hypothetical protein.
 
  
 0.961
AEF24324.1
KEGG: pmy:Pmen_2336 hypothetical protein.
 
  
 0.960
AEF24325.1
KEGG: pmy:Pmen_2337 hypothetical protein.
 
     0.940
AEF24320.1
Type VI secretion system Vgr family protein; KEGG: pmy:Pmen_2332 rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Gp5, C-terminal.
 
  
 0.932
AEF20228.1
Type VI secretion system Vgr family protein; KEGG: pag:PLES_24191 hypothetical protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Protein of unknown function DUF2345; Gp5, C-terminal.
 
  
 0.793
AEF20241.1
KEGG: pap:PSPA7_0149 hypothetical protein; TIGRFAM: Type IV / VI secretion system, DotU; Type VI secretion system, OmpA/MotB; PFAM: Type IV / VI secretion system, DotU; Outer membrane protein, OmpA/MotB, C-terminal.
 
    0.782
AEF20242.1
Type VI secretion protein IcmF; KEGG: pmy:Pmen_2316 ImcF domain-containing protein; TIGRFAM: Type VI secretion system, IcmF; PFAM: ImcF-related; Domain of unknown function DUF1215.
 
    0.773
AEF20230.1
Type VI secretion protein, VC_A0111 family; KEGG: pag:PLES_00901 hypothetical protein; TIGRFAM: Protein of unknown function DUF1305; PFAM: Protein of unknown function DUF1305.
 
    0.770
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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