STRINGSTRING
AEF24342.1 AEF24342.1 AEF24341.1 AEF24341.1 AEF23636.1 AEF23636.1 AEF20097.1 AEF20097.1 AEF20047.1 AEF20047.1 AEF23341.1 AEF23341.1 AEF20545.1 AEF20545.1 AEF24018.1 AEF24018.1 AEF21169.1 AEF21169.1 AEF21610.1 AEF21610.1 AEF21171.1 AEF21171.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEF24342.1Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: pfl:PFL_4876 sigma-54 dependent DNA-binding response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core. (440 aa)    
Predicted Functional Partners:
AEF24341.1
ATP-binding region ATPase domain protein; KEGG: pfl:PFL_4875 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain.
 0.997
AEF23636.1
RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.771
AEF20097.1
ATP-binding region ATPase domain protein; KEGG: pag:PLES_59081 putative two-component sensor; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain.
 
 0.692
AEF20047.1
ATP-binding region ATPase domain protein; KEGG: pmy:Pmen_4562 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain.
 
 0.679
AEF23341.1
TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain; PAS fold; KEGG: pmy:Pmen_3647 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain; PAS.
  
 
 0.674
AEF20545.1
KEGG: mdi:METDI0924 putative sensor hybrid histidine kinase with multiple PAS/PAC and response regulator receiver domains; PFAM: ATPase-like, ATP-binding domain; PAS fold-4; SMART: ATPase-like, ATP-binding domain; PAC motif.
 
 
 0.654
AEF24018.1
ATP-binding region ATPase domain protein; KEGG: pmy:Pmen_4293 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain.
 
 0.645
AEF21169.1
KEGG: pst:PSPTO_3195 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain.
 
 
 0.609
AEF21610.1
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: pfo:Pfl01_3138 multi-sensor hybrid histidine kinase; SMART: Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain.
 
 
 0.608
AEF21171.1
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; KEGG: mch:Mchl_1730 PAS/PAC sensor hybrid histidine kinase; SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAC motif; PAS.
 
 
 0.605
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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