STRINGSTRING
AEF24405.1 AEF24405.1 AEF24406.1 AEF24406.1 AEF24404.1 AEF24404.1 AEF24403.1 AEF24403.1 AEF24402.1 AEF24402.1 AEF24401.1 AEF24401.1 AEF24400.1 AEF24400.1 AEF24407.1 AEF24407.1 AEF24420.1 AEF24420.1 AEF22101.1 AEF22101.1 AEF24399.1 AEF24399.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
AEF24405.1PFAM: Type II/III secretion system; KEGG: psb:Psyr_4391 type II and III secretion system protein; Belongs to the bacterial secretin family. (412 aa)    
Predicted Functional Partners:
AEF24406.1
TIGRFAM: Pilus assembly, Flp-type CpaB; PFAM: SAF domain; KEGG: pfs:PFLU0648 hypothetical protein; SMART: SAF domain.
 
  
 0.989
AEF24404.1
KEGG: pfl:PFL_0696 hypothetical protein.
 
  
 0.982
AEF24403.1
PFAM: Type II secretion system protein E; KEGG: ppw:PputW619_0846 type II secretion system protein E.
  
 0.979
AEF24402.1
PFAM: Type II secretion system F domain; KEGG: pfs:PFLU0644 hypothetical protein.
 
  
 0.970
AEF24401.1
PFAM: Type II secretion system F domain; KEGG: pfs:PFLU0643 hypothetical protein.
 
  
 0.963
AEF24400.1
KEGG: pfs:PFLU0642 putative lipoprotein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat.
 
  
 0.940
AEF24407.1
PFAM: Flp/Fap pilin component; KEGG: rso:RS02598 putative pilin protein.
 
  
 0.822
AEF24420.1
KEGG: smt:Smal_2328 membrane protein-like protein.
 
  
 0.809
AEF22101.1
P-type conjugative transfer ATPase TrbB; KEGG: pna:Pnap_4195 type II secretion system protein E; TIGRFAM: ATPase, P-type conjugative transfer, TrbB; PFAM: Type II secretion system protein E.
  
 0.780
AEF24399.1
KEGG: pfs:PFLU0641 hypothetical protein.
  
  
 0.742
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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