STRINGSTRING
AGA84627.1 AGA84627.1 AGA84626.1 AGA84626.1 AGA84625.1 AGA84625.1 AGA84622.1 AGA84622.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA84627.1PilZ domain-containing protein; PFAM: PilZ domain. (88 aa)    
Predicted Functional Partners:
AGA84626.1
PFAM: Bacterial lipid A biosynthesis acyltransferase.
  
  
 0.805
AGA84625.1
PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I.
     
 0.587
AGA84622.1
PFAM: Polynucleotide kinase 3 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain.
       0.413
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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