Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA84637.1 | AGA85908.1 | Psest_0024 | Psest_1351 | LysM domain-containing protein; PFAM: LysM domain. | Hypothetical protein. | 0.739 |
AGA84637.1 | AGA86245.1 | Psest_0024 | Psest_1695 | LysM domain-containing protein; PFAM: LysM domain. | Tfp pilus assembly protein PilZ; PFAM: PilZ domain. | 0.774 |
AGA84637.1 | AGA87861.1 | Psest_0024 | Psest_3371 | LysM domain-containing protein; PFAM: LysM domain. | TIGRFAM: type IV pilus modification protein PilV; prepilin-type N-terminal cleavage/methylation domain. | 0.747 |
AGA84637.1 | AGA87862.1 | Psest_0024 | Psest_3372 | LysM domain-containing protein; PFAM: LysM domain. | Tfp pilus assembly protein PilW. | 0.741 |
AGA84637.1 | AGA88192.1 | Psest_0024 | Psest_3715 | LysM domain-containing protein; PFAM: LysM domain. | Type IV pilus secretin PilQ/competence protein; PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ. | 0.955 |
AGA84637.1 | AGA88193.1 | Psest_0024 | Psest_3716 | LysM domain-containing protein; PFAM: LysM domain. | PFAM: Pilus assembly protein, PilP. | 0.891 |
AGA84637.1 | AGA88194.1 | Psest_0024 | Psest_3717 | LysM domain-containing protein; PFAM: LysM domain. | PFAM: Pilus assembly protein, PilO. | 0.900 |
AGA84637.1 | AGA88195.1 | Psest_0024 | Psest_3718 | LysM domain-containing protein; PFAM: LysM domain. | PFAM: Fimbrial assembly protein (PilN). | 0.899 |
AGA84637.1 | AGA88196.1 | Psest_0024 | Psest_3719 | LysM domain-containing protein; PFAM: LysM domain. | PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM. | 0.897 |
AGA84637.1 | AGA88343.1 | Psest_0024 | Psest_3868 | LysM domain-containing protein; PFAM: LysM domain. | Hypothetical protein; PFAM: Domain of unknown function (DUF1508). | 0.920 |
AGA85908.1 | AGA84637.1 | Psest_1351 | Psest_0024 | Hypothetical protein. | LysM domain-containing protein; PFAM: LysM domain. | 0.739 |
AGA85908.1 | AGA86245.1 | Psest_1351 | Psest_1695 | Hypothetical protein. | Tfp pilus assembly protein PilZ; PFAM: PilZ domain. | 0.760 |
AGA85908.1 | AGA87861.1 | Psest_1351 | Psest_3371 | Hypothetical protein. | TIGRFAM: type IV pilus modification protein PilV; prepilin-type N-terminal cleavage/methylation domain. | 0.624 |
AGA85908.1 | AGA87862.1 | Psest_1351 | Psest_3372 | Hypothetical protein. | Tfp pilus assembly protein PilW. | 0.683 |
AGA85908.1 | AGA88192.1 | Psest_1351 | Psest_3715 | Hypothetical protein. | Type IV pilus secretin PilQ/competence protein; PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ. | 0.748 |
AGA85908.1 | AGA88193.1 | Psest_1351 | Psest_3716 | Hypothetical protein. | PFAM: Pilus assembly protein, PilP. | 0.748 |
AGA85908.1 | AGA88194.1 | Psest_1351 | Psest_3717 | Hypothetical protein. | PFAM: Pilus assembly protein, PilO. | 0.773 |
AGA85908.1 | AGA88195.1 | Psest_1351 | Psest_3718 | Hypothetical protein. | PFAM: Fimbrial assembly protein (PilN). | 0.811 |
AGA85908.1 | AGA88196.1 | Psest_1351 | Psest_3719 | Hypothetical protein. | PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM. | 0.739 |
AGA86245.1 | AGA84637.1 | Psest_1695 | Psest_0024 | Tfp pilus assembly protein PilZ; PFAM: PilZ domain. | LysM domain-containing protein; PFAM: LysM domain. | 0.774 |
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