STRINGSTRING
AGA84688.1 AGA84688.1 AGA87381.1 AGA87381.1 AGA86500.1 AGA86500.1 AGA87744.1 AGA87744.1 AGA87741.1 AGA87741.1 AGA85564.1 AGA85564.1 AGA84685.1 AGA84685.1 AGA84687.1 AGA84687.1 AGA84686.1 AGA84686.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA84688.1PFAM: Protein of unknown function (DUF1458). (71 aa)    
Predicted Functional Partners:
AGA87381.1
Hypothetical protein; PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
   
    0.735
AGA86500.1
PFAM: Bacterial protein of unknown function (DUF883).
   
    0.583
AGA87744.1
Bacterioferritin (cytochrome b1); PFAM: Ferritin-like domain.
   
    0.574
AGA87741.1
PFAM: SmpA / OmlA family.
   
    0.537
AGA85564.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: Domain of Unknown Function (DUF748).
  
    0.530
AGA84685.1
Hypothetical protein; Belongs to the glycosyl hydrolase 1 family.
       0.427
AGA84687.1
Hypothetical protein.
       0.421
AGA84686.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
       0.406
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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