Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA84699.1 | AGA84700.1 | Psest_0086 | Psest_0087 | Hypothetical protein. | Hypothetical protein. | 0.568 |
AGA84699.1 | AGA85226.1 | Psest_0086 | Psest_0627 | Hypothetical protein. | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase. | 0.499 |
AGA84699.1 | AGA85751.1 | Psest_0086 | Psest_1187 | Hypothetical protein. | Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth). | 0.537 |
AGA84699.1 | AGA86639.1 | Psest_0086 | Psest_2105 | Hypothetical protein. | PFAM: Response regulator receiver domain. | 0.500 |
AGA84699.1 | AGA86664.1 | Psest_0086 | Psest_2130 | Hypothetical protein. | Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth). | 0.537 |
AGA84699.1 | AGA88286.1 | Psest_0086 | Psest_3811 | Hypothetical protein. | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth). | 0.537 |
AGA84699.1 | mutM | Psest_0086 | Psest_0239 | Hypothetical protein. | formamidopyrimidine-DNA glycosylase Fpg; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.493 |
AGA84699.1 | polA | Psest_0086 | Psest_4219 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.625 |
AGA84699.1 | rnfE | Psest_0086 | Psest_3117 | Hypothetical protein. | Electron transport complex, RnfABCDGE type, E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.753 |
AGA84699.1 | rnfG | Psest_0086 | Psest_3116 | Hypothetical protein. | Electron transport complex, RnfABCDGE type, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. | 0.637 |
AGA84700.1 | AGA84699.1 | Psest_0087 | Psest_0086 | Hypothetical protein. | Hypothetical protein. | 0.568 |
AGA85226.1 | AGA84699.1 | Psest_0627 | Psest_0086 | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase. | Hypothetical protein. | 0.499 |
AGA85226.1 | polA | Psest_0627 | Psest_4219 | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.639 |
AGA85751.1 | AGA84699.1 | Psest_1187 | Psest_0086 | Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth). | Hypothetical protein. | 0.537 |
AGA85751.1 | AGA86664.1 | Psest_1187 | Psest_2130 | Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth). | Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth). | 0.917 |
AGA85751.1 | AGA88286.1 | Psest_1187 | Psest_3811 | Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth). | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth). | 0.927 |
AGA85751.1 | polA | Psest_1187 | Psest_4219 | Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth). | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.733 |
AGA86639.1 | AGA84699.1 | Psest_2105 | Psest_0086 | PFAM: Response regulator receiver domain. | Hypothetical protein. | 0.500 |
AGA86664.1 | AGA84699.1 | Psest_2130 | Psest_0086 | Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth). | Hypothetical protein. | 0.537 |
AGA86664.1 | AGA85751.1 | Psest_2130 | Psest_1187 | Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth). | Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth). | 0.917 |
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