STRINGSTRING
AGA84839.1 AGA84839.1 AGA86214.1 AGA86214.1 eutC eutC AGA85267.1 AGA85267.1 AGA87278.1 AGA87278.1 glpK glpK AGA86007.1 AGA86007.1 AGA87281.1 AGA87281.1 AGA85265.1 AGA85265.1 AGA84840.1 AGA84840.1 AGA84838.1 AGA84838.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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[Homology]
Score
AGA84839.1PFAM: Glycerophosphoryl diester phosphodiesterase family. (371 aa)    
Predicted Functional Partners:
AGA86214.1
PFAM: Glycerophosphoryl diester phosphodiesterase family.
     
 0.921
eutC
Ethanolamine ammonia-lyase, small subunit; PFAM: Ethanolamine ammonia-lyase light chain (EutC); Belongs to the EutC family.
     
  0.900
AGA85267.1
PFAM: Ethanolamine ammonia lyase large subunit (EutB).
     
  0.900
AGA87278.1
PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.892
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.881
AGA86007.1
Glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.739
AGA87281.1
Glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.739
AGA85265.1
PFAM: PhoD-like phosphatase.
 
  
 0.647
AGA84840.1
Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.
  
    0.612
AGA84838.1
glucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component; PFAM: Protein of unknown function (DUF2868).
       0.587
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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