Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA84853.1 | AGA84854.1 | Psest_0242 | Psest_0243 | PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase. | Hypothetical protein. | 0.801 |
AGA84853.1 | AGA84856.1 | Psest_0242 | Psest_0245 | PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase. | Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. | 0.526 |
AGA84853.1 | AGA84858.1 | Psest_0242 | Psest_0247 | PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase. | PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | 0.429 |
AGA84853.1 | AGA88188.1 | Psest_0242 | Psest_3711 | PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase. | PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II. | 0.880 |
AGA84853.1 | coaD | Psest_0242 | Psest_0244 | PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase. | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.568 |
AGA84854.1 | AGA84853.1 | Psest_0243 | Psest_0242 | Hypothetical protein. | PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase. | 0.801 |
AGA84854.1 | AGA84856.1 | Psest_0243 | Psest_0245 | Hypothetical protein. | Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. | 0.441 |
AGA84854.1 | AGA84858.1 | Psest_0243 | Psest_0247 | Hypothetical protein. | PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | 0.450 |
AGA84854.1 | coaD | Psest_0243 | Psest_0244 | Hypothetical protein. | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.613 |
AGA84856.1 | AGA84853.1 | Psest_0245 | Psest_0242 | Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. | PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase. | 0.526 |
AGA84856.1 | AGA84854.1 | Psest_0245 | Psest_0243 | Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. | Hypothetical protein. | 0.441 |
AGA84856.1 | AGA84857.1 | Psest_0245 | Psest_0246 | Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. | Hypothetical protein. | 0.945 |
AGA84856.1 | AGA84858.1 | Psest_0245 | Psest_0247 | Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. | PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | 0.916 |
AGA84856.1 | AGA84859.1 | Psest_0245 | Psest_0248 | Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. | PFAM: Bacterial regulatory proteins, tetR family. | 0.820 |
AGA84856.1 | coaD | Psest_0245 | Psest_0244 | Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.580 |
AGA84857.1 | AGA84856.1 | Psest_0246 | Psest_0245 | Hypothetical protein. | Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. | 0.945 |
AGA84857.1 | AGA84858.1 | Psest_0246 | Psest_0247 | Hypothetical protein. | PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | 0.836 |
AGA84857.1 | AGA84859.1 | Psest_0246 | Psest_0248 | Hypothetical protein. | PFAM: Bacterial regulatory proteins, tetR family. | 0.775 |
AGA84857.1 | coaD | Psest_0246 | Psest_0244 | Hypothetical protein. | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.545 |
AGA84858.1 | AGA84853.1 | Psest_0247 | Psest_0242 | PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase. | 0.429 |
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