Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA84856.1 | AGA84857.1 | Psest_0245 | Psest_0246 | Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. | Hypothetical protein. | 0.945 |
AGA84856.1 | AGA84858.1 | Psest_0245 | Psest_0247 | Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. | PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | 0.916 |
AGA84856.1 | AGA84859.1 | Psest_0245 | Psest_0248 | Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. | PFAM: Bacterial regulatory proteins, tetR family. | 0.820 |
AGA84856.1 | AGA84861.1 | Psest_0245 | Psest_0250 | Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. | Glycosyl transferase; PFAM: GSPII_E N-terminal domain. | 0.401 |
AGA84857.1 | AGA84856.1 | Psest_0246 | Psest_0245 | Hypothetical protein. | Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. | 0.945 |
AGA84857.1 | AGA84858.1 | Psest_0246 | Psest_0247 | Hypothetical protein. | PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | 0.836 |
AGA84857.1 | AGA84859.1 | Psest_0246 | Psest_0248 | Hypothetical protein. | PFAM: Bacterial regulatory proteins, tetR family. | 0.775 |
AGA84857.1 | AGA84862.1 | Psest_0246 | Psest_0251 | Hypothetical protein. | Hypothetical protein. | 0.418 |
AGA84857.1 | AGA86989.1 | Psest_0246 | Psest_2467 | Hypothetical protein. | Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: Thioesterase domain. | 0.449 |
AGA84858.1 | AGA84856.1 | Psest_0247 | Psest_0245 | PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. | 0.916 |
AGA84858.1 | AGA84857.1 | Psest_0247 | Psest_0246 | PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | Hypothetical protein. | 0.836 |
AGA84858.1 | AGA84859.1 | Psest_0247 | Psest_0248 | PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | PFAM: Bacterial regulatory proteins, tetR family. | 0.855 |
AGA84859.1 | AGA84856.1 | Psest_0248 | Psest_0245 | PFAM: Bacterial regulatory proteins, tetR family. | Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase. | 0.820 |
AGA84859.1 | AGA84857.1 | Psest_0248 | Psest_0246 | PFAM: Bacterial regulatory proteins, tetR family. | Hypothetical protein. | 0.775 |
AGA84859.1 | AGA84858.1 | Psest_0248 | Psest_0247 | PFAM: Bacterial regulatory proteins, tetR family. | PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family. | 0.855 |
AGA84859.1 | AGA84860.1 | Psest_0248 | Psest_0249 | PFAM: Bacterial regulatory proteins, tetR family. | PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.460 |
AGA84859.1 | AGA84861.1 | Psest_0248 | Psest_0250 | PFAM: Bacterial regulatory proteins, tetR family. | Glycosyl transferase; PFAM: GSPII_E N-terminal domain. | 0.468 |
AGA84859.1 | AGA84862.1 | Psest_0248 | Psest_0251 | PFAM: Bacterial regulatory proteins, tetR family. | Hypothetical protein. | 0.524 |
AGA84859.1 | AGA86866.1 | Psest_0248 | Psest_2340 | PFAM: Bacterial regulatory proteins, tetR family. | PFAM: alpha/beta hydrolase fold. | 0.527 |
AGA84859.1 | AGA86977.1 | Psest_0248 | Psest_2455 | PFAM: Bacterial regulatory proteins, tetR family. | acyl-CoA thioesterase. | 0.449 |
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