STRINGSTRING
AGA84889.1 AGA84889.1 AGA84890.1 AGA84890.1 AGA84888.1 AGA84888.1 metXS metXS AGA84886.1 AGA84886.1 AGA84887.1 AGA84887.1 AGA88265.1 AGA88265.1 AGA87054.1 AGA87054.1 AGA87305.1 AGA87305.1 AGA87774.1 AGA87774.1 AGA84892.1 AGA84892.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA84889.1Hypothetical protein. (140 aa)    
Predicted Functional Partners:
AGA84890.1
PFAM: Methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW.
      0.920
AGA84888.1
Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
  
    0.919
metXS
Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.
       0.725
AGA84886.1
PFAM: Protein of unknown function (DUF3392).
       0.628
AGA84887.1
Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.628
AGA88265.1
Cytochrome c5.
  
     0.590
AGA87054.1
Hypothetical protein; PFAM: FixH.
  
     0.523
AGA87305.1
Xanthosine triphosphate pyrophosphatase; PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family.
  
    0.518
AGA87774.1
Putative membrane protein; PFAM: Cobalt uptake substrate-specific transmembrane region.
  
     0.518
AGA84892.1
PFAM: Dynamin family.
       0.509
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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