STRINGSTRING
AGA84927.1 AGA84927.1 AGA86630.1 AGA86630.1 AGA88743.1 AGA88743.1 AGA85624.1 AGA85624.1 AGA85063.1 AGA85063.1 AGA87774.1 AGA87774.1 AGA86667.1 AGA86667.1 AGA85076.1 AGA85076.1 AGA84926.1 AGA84926.1 AGA85095.1 AGA85095.1 AGA87054.1 AGA87054.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA84927.1PFAM: Cytochrome C'. (148 aa)    
Predicted Functional Partners:
AGA86630.1
PFAM: Domain of unknown function (DUF1883).
  
     0.721
AGA88743.1
Hypothetical protein.
  
    0.710
AGA85624.1
Hypothetical protein.
  
     0.703
AGA85063.1
PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
  
     0.653
AGA87774.1
Putative membrane protein; PFAM: Cobalt uptake substrate-specific transmembrane region.
  
     0.641
AGA86667.1
Hypothetical protein; PFAM: Family of unknown function (DUF490).
 
     0.639
AGA85076.1
Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase.
  
     0.575
AGA84926.1
Hypothetical protein.
       0.566
AGA85095.1
Putative membrane protein affecting hemolysin expression; PFAM: HAMP domain; Bacterial virulence factor haemolysin.
  
     0.564
AGA87054.1
Hypothetical protein; PFAM: FixH.
  
     0.561
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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