Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA84955.1 | AGA84956.1 | Psest_0344 | Psest_0345 | DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; manually curated; Belongs to the DEAD box helicase family. | PFAM: Protein of unknown function (DUF785). | 0.514 |
AGA84956.1 | AGA84955.1 | Psest_0345 | Psest_0344 | PFAM: Protein of unknown function (DUF785). | DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; manually curated; Belongs to the DEAD box helicase family. | 0.514 |
AGA84956.1 | AGA86850.1 | Psest_0345 | Psest_2324 | PFAM: Protein of unknown function (DUF785). | Hypothetical protein. | 0.794 |
AGA84956.1 | AGA86851.1 | Psest_0345 | Psest_2325 | PFAM: Protein of unknown function (DUF785). | PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligase-related protein. | 0.793 |
AGA84956.1 | AGA87762.1 | Psest_0345 | Psest_3271 | PFAM: Protein of unknown function (DUF785). | PFAM: LppC putative lipoprotein. | 0.418 |
AGA84956.1 | AGA87853.1 | Psest_0345 | Psest_3363 | PFAM: Protein of unknown function (DUF785). | Hypothetical protein. | 0.574 |
AGA84956.1 | AGA88428.1 | Psest_0345 | Psest_3954 | PFAM: Protein of unknown function (DUF785). | Small protein A (tmRNA-binding); PFAM: SmpA / OmlA family. | 0.497 |
AGA84956.1 | rimK | Psest_0345 | Psest_3993 | PFAM: Protein of unknown function (DUF785). | PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; Belongs to the RimK family. | 0.518 |
AGA86850.1 | AGA84956.1 | Psest_2324 | Psest_0345 | Hypothetical protein. | PFAM: Protein of unknown function (DUF785). | 0.794 |
AGA86850.1 | AGA86851.1 | Psest_2324 | Psest_2325 | Hypothetical protein. | PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligase-related protein. | 0.958 |
AGA86850.1 | AGA87762.1 | Psest_2324 | Psest_3271 | Hypothetical protein. | PFAM: LppC putative lipoprotein. | 0.454 |
AGA86851.1 | AGA84956.1 | Psest_2325 | Psest_0345 | PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligase-related protein. | PFAM: Protein of unknown function (DUF785). | 0.793 |
AGA86851.1 | AGA86850.1 | Psest_2325 | Psest_2324 | PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligase-related protein. | Hypothetical protein. | 0.958 |
AGA87762.1 | AGA84956.1 | Psest_3271 | Psest_0345 | PFAM: LppC putative lipoprotein. | PFAM: Protein of unknown function (DUF785). | 0.418 |
AGA87762.1 | AGA86850.1 | Psest_3271 | Psest_2324 | PFAM: LppC putative lipoprotein. | Hypothetical protein. | 0.454 |
AGA87853.1 | AGA84956.1 | Psest_3363 | Psest_0345 | Hypothetical protein. | PFAM: Protein of unknown function (DUF785). | 0.574 |
AGA88428.1 | AGA84956.1 | Psest_3954 | Psest_0345 | Small protein A (tmRNA-binding); PFAM: SmpA / OmlA family. | PFAM: Protein of unknown function (DUF785). | 0.497 |
rimK | AGA84956.1 | Psest_3993 | Psest_0345 | PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; Belongs to the RimK family. | PFAM: Protein of unknown function (DUF785). | 0.518 |