STRINGSTRING
AGA84995.1 AGA84995.1 AGA85076.1 AGA85076.1 AGA85624.1 AGA85624.1 AGA86630.1 AGA86630.1 AGA87457.1 AGA87457.1 AGA85095.1 AGA85095.1 AGA87794.1 AGA87794.1 AGA87480.1 AGA87480.1 AGA85180.1 AGA85180.1 AGA86987.1 AGA86987.1 AGA86372.1 AGA86372.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA84995.1PFAM: outer membrane porin, OprD family. (423 aa)    
Predicted Functional Partners:
AGA85076.1
Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase.
  
     0.750
AGA85624.1
Hypothetical protein.
  
     0.729
AGA86630.1
PFAM: Domain of unknown function (DUF1883).
  
     0.704
AGA87457.1
Hypothetical protein.
  
     0.703
AGA85095.1
Putative membrane protein affecting hemolysin expression; PFAM: HAMP domain; Bacterial virulence factor haemolysin.
  
     0.701
AGA87794.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
  
     0.690
AGA87480.1
PFAM: Arc-like DNA binding domain.
  
     0.678
AGA85180.1
Hypothetical protein.
  
     0.670
AGA86987.1
Hypothetical protein.
  
     0.664
AGA86372.1
Hypothetical protein.
  
     0.663
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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