STRINGSTRING
AGA84996.1 AGA84996.1 AGA84998.1 AGA84998.1 AGA84997.1 AGA84997.1 AGA84995.1 AGA84995.1 AGA85000.1 AGA85000.1 AGA84999.1 AGA84999.1 AGA86834.1 AGA86834.1 AGA85740.1 AGA85740.1 AGA85310.1 AGA85310.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA84996.1Conserved secreted protein; PFAM: Late embryogenesis abundant protein. (167 aa)    
Predicted Functional Partners:
AGA84998.1
Membrane-bound serine protease (ClpP class); PFAM: NfeD-like.
 
     0.806
AGA84997.1
Membrane protease subunit, stomatin/prohibitin; PFAM: SPFH domain / Band 7 family.
       0.777
AGA84995.1
PFAM: outer membrane porin, OprD family.
 
     0.541
AGA85000.1
Hypothetical protein.
       0.509
AGA84999.1
Hypothetical protein.
       0.501
AGA86834.1
Putative Fe-S protein; PFAM: Protein of unknown function (DUF1289).
  
     0.412
AGA85740.1
PFAM: Urea transporter.
  
     0.408
AGA85310.1
PFAM: Protein of unknown function (DUF1631).
  
     0.401
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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