STRINGSTRING
AGA85014.1 AGA85014.1 AGA85015.1 AGA85015.1 AGA85017.1 AGA85017.1 AGA85016.1 AGA85016.1 AGA85013.1 AGA85013.1 fni fni AGA86254.1 AGA86254.1 AGA85011.1 AGA85011.1 AGA86253.1 AGA86253.1 AGA86255.1 AGA86255.1 ubiA ubiA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGA85014.1PFAM: Lycopene cyclase protein; TIGRFAM: lycopene cyclase family protein; lycopene cyclase. (389 aa)    
Predicted Functional Partners:
AGA85015.1
Phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase.
 
 
 0.996
AGA85017.1
PFAM: Fatty acid hydroxylase superfamily.
 
  
 0.982
AGA85016.1
Phytoene/squalene synthetase; PFAM: Squalene/phytoene synthase.
 
  
 0.970
AGA85013.1
Glycosyltransferase, MGT family; PFAM: UDP-glucoronosyl and UDP-glucosyl transferase; TIGRFAM: glycosyltransferase, MGT family; Belongs to the UDP-glycosyltransferase family.
 
  
 0.883
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
    0.796
AGA86254.1
Electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein domain.
  
 
 0.731
AGA85011.1
Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
 
 0.707
AGA86253.1
Flavin-dependent dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.694
AGA86255.1
Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
  
 
 0.672
ubiA
4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
  
  
 0.424
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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