STRINGSTRING
AGA85065.1 AGA85065.1 AGA85063.1 AGA85063.1 AGA85064.1 AGA85064.1 AGA85061.1 AGA85061.1 AGA85066.1 AGA85066.1 AGA85060.1 AGA85060.1 AGA85067.1 AGA85067.1 tsaD tsaD AGA85059.1 AGA85059.1 AGA85062.1 AGA85062.1 AGA85068.1 AGA85068.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA85065.1Mn2+-dependent serine/threonine protein kinase; PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family. (481 aa)    
Predicted Functional Partners:
AGA85063.1
PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
 
   
 0.954
AGA85064.1
PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
 
   
 0.952
AGA85061.1
Lipopolysaccharide kinase (Kdo/WaaP) family; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
 
     0.951
AGA85066.1
Putative carbamoyl transferase, NodU family; PFAM: Carbamoyltransferase.
 
     0.944
AGA85060.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
     0.920
AGA85067.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
     0.897
tsaD
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 0.895
AGA85059.1
PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I.
 
   
 0.816
AGA85062.1
PFAM: Glycosyltransferase family 9 (heptosyltransferase).
     
 0.802
AGA85068.1
PFAM: Glycosyltransferase family 25 (LPS biosynthesis protein).
 
     0.791
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.