Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA84816.1 | AGA85076.1 | Psest_0205 | Psest_0469 | PFAM: outer membrane porin, OprD family. | Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase. | 0.752 |
AGA84816.1 | AGA85094.1 | Psest_0205 | Psest_0487 | PFAM: outer membrane porin, OprD family. | PFAM: Protein of unknown function (DUF330). | 0.626 |
AGA84816.1 | AGA86257.1 | Psest_0205 | Psest_1708 | PFAM: outer membrane porin, OprD family. | Hypothetical protein. | 0.565 |
AGA84816.1 | AGA87457.1 | Psest_0205 | Psest_2954 | PFAM: outer membrane porin, OprD family. | Hypothetical protein. | 0.662 |
AGA85075.1 | AGA85076.1 | Psest_0468 | Psest_0469 | PFAM: Mig-14. | Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase. | 0.869 |
AGA85075.1 | msbA | Psest_0468 | Psest_0467 | PFAM: Mig-14. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.797 |
AGA85076.1 | AGA84816.1 | Psest_0469 | Psest_0205 | Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase. | PFAM: outer membrane porin, OprD family. | 0.752 |
AGA85076.1 | AGA85075.1 | Psest_0469 | Psest_0468 | Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase. | PFAM: Mig-14. | 0.869 |
AGA85076.1 | AGA85094.1 | Psest_0469 | Psest_0487 | Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase. | PFAM: Protein of unknown function (DUF330). | 0.767 |
AGA85076.1 | AGA85634.1 | Psest_0469 | Psest_1068 | Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase. | PFAM: outer membrane porin, OprD family. | 0.762 |
AGA85076.1 | AGA85654.1 | Psest_0469 | Psest_1088 | Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase. | PFAM: outer membrane porin, OprD family. | 0.764 |
AGA85076.1 | AGA86133.1 | Psest_0469 | Psest_1583 | Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase. | PFAM: outer membrane porin, OprD family. | 0.751 |
AGA85076.1 | AGA86257.1 | Psest_0469 | Psest_1708 | Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase. | Hypothetical protein. | 0.753 |
AGA85076.1 | AGA86501.1 | Psest_0469 | Psest_1957 | Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase. | PFAM: outer membrane porin, OprD family. | 0.765 |
AGA85076.1 | AGA87457.1 | Psest_0469 | Psest_2954 | Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase. | Hypothetical protein. | 0.759 |
AGA85076.1 | msbA | Psest_0469 | Psest_0467 | Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.824 |
AGA85094.1 | AGA84816.1 | Psest_0487 | Psest_0205 | PFAM: Protein of unknown function (DUF330). | PFAM: outer membrane porin, OprD family. | 0.626 |
AGA85094.1 | AGA85076.1 | Psest_0487 | Psest_0469 | PFAM: Protein of unknown function (DUF330). | Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase. | 0.767 |
AGA85094.1 | AGA85634.1 | Psest_0487 | Psest_1068 | PFAM: Protein of unknown function (DUF330). | PFAM: outer membrane porin, OprD family. | 0.608 |
AGA85094.1 | AGA85654.1 | Psest_0487 | Psest_1088 | PFAM: Protein of unknown function (DUF330). | PFAM: outer membrane porin, OprD family. | 0.617 |
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