STRINGSTRING
AGA85111.1 AGA85111.1 AGA85112.1 AGA85112.1 AGA86123.1 AGA86123.1 AGA85113.1 AGA85113.1 AGA85110.1 AGA85110.1 AGA85109.1 AGA85109.1 AGA85108.1 AGA85108.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGA85111.1Putative effector of murein hydrolase LrgA; PFAM: LrgA family. (120 aa)    
Predicted Functional Partners:
AGA85112.1
Putative effector of murein hydrolase; PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein.
 
  
 0.988
AGA86123.1
Putative effector of murein hydrolase; PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein.
 
  
 0.949
AGA85113.1
Peptidase S16, lon domain protein; PFAM: ATP-dependent protease La (LON) domain.
       0.783
AGA85110.1
Acyl dehydratase; PFAM: MaoC like domain.
       0.530
AGA85109.1
Hypothetical protein; PFAM: MORN repeat; Peptidase C13 family.
     
 0.447
AGA85108.1
Putative nucleoside-diphosphate sugar epimerase; PFAM: Semialdehyde dehydrogenase, NAD binding domain.
       0.413
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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