STRINGSTRING
AGA85159.1 AGA85159.1 AGA85095.1 AGA85095.1 AGA85620.1 AGA85620.1 AGA85618.1 AGA85618.1 AGA85619.1 AGA85619.1 AGA85102.1 AGA85102.1 AGA88758.1 AGA88758.1 AGA85065.1 AGA85065.1 AGA87952.1 AGA87952.1 AGA85063.1 AGA85063.1 AGA87480.1 AGA87480.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA85159.1PFAM: Bacterial protein of unknown function (Gcw_chp); TIGRFAM: conserved hypothetical protein, proteobacterial. (239 aa)    
Predicted Functional Partners:
AGA85095.1
Putative membrane protein affecting hemolysin expression; PFAM: HAMP domain; Bacterial virulence factor haemolysin.
  
     0.743
AGA85620.1
Hypothetical protein.
  
     0.743
AGA85618.1
Hypothetical protein.
  
     0.740
AGA85619.1
Uncharacterized protein involved in chromosome partitioning.
  
     0.723
AGA85102.1
HDOD domain-containing protein; PFAM: HDOD domain.
  
     0.705
AGA88758.1
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.623
AGA85065.1
Mn2+-dependent serine/threonine protein kinase; PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
  
     0.620
AGA87952.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
  
     0.571
AGA85063.1
PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
  
     0.564
AGA87480.1
PFAM: Arc-like DNA binding domain.
  
     0.556
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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