STRINGSTRING
AGA85225.1 AGA85225.1 AGA85226.1 AGA85226.1 AGA84643.1 AGA84643.1 AGA88515.1 AGA88515.1 AGA88517.1 AGA88517.1 AGA85664.1 AGA85664.1 AGA87896.1 AGA87896.1 AGA85468.1 AGA85468.1 AGA87897.1 AGA87897.1 AGA88514.1 AGA88514.1 AGA85467.1 AGA85467.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA85225.1Hypothetical protein. (552 aa)    
Predicted Functional Partners:
AGA85226.1
DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase.
 
   
 0.957
AGA84643.1
Putative NADH-flavin reductase.
  
    0.818
AGA88515.1
Putative transcriptional regulator with HTH domain; PFAM: Divergent AAA domain.
  
    0.809
AGA88517.1
PFAM: Type I restriction modification DNA specificity domain; manually curated.
  
  
 0.767
AGA85664.1
PFAM: Type I restriction modification DNA specificity domain; manually curated.
  
  
 0.762
AGA87896.1
PFAM: Type I restriction modification DNA specificity domain; manually curated.
  
  
 0.762
AGA85468.1
PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit.
  
    0.759
AGA87897.1
PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit.
  
    0.759
AGA88514.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.759
AGA85467.1
Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase; HsdM N-terminal domain.
  
  
 0.624
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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