STRINGSTRING
AGA85402.1 AGA85402.1 AGA85420.1 AGA85420.1 AGA85417.1 AGA85417.1 AGA85418.1 AGA85418.1 AGA85416.1 AGA85416.1 AGA85415.1 AGA85415.1 AGA85403.1 AGA85403.1 AGA85404.1 AGA85404.1 AGA86820.1 AGA86820.1 AGA85413.1 AGA85413.1 AGA85414.1 AGA85414.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGA85402.1Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c; Cytochrome D1 heme domain. (503 aa)    
Predicted Functional Partners:
AGA85420.1
Nitric oxide reductase large subunit; PFAM: Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.976
AGA85417.1
Transcriptional regulator.
 
  
 0.970
AGA85418.1
Transcriptional regulator, AsnC family.
 
  
 0.968
AGA85416.1
Transcriptional regulator.
 
  
 0.960
AGA85415.1
Transcriptional regulator.
 
  
 0.959
AGA85403.1
uroporphyrinogen-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
    0.958
AGA85404.1
PFAM: Radical SAM superfamily; TIGRFAM: heme d1 biosynthesis radical SAM protein NirJ; radical SAM additional 4Fe4S-binding domain.
 
  
 0.956
AGA86820.1
Nitric oxide reductase large subunit; PFAM: Cytochrome C and Quinol oxidase polypeptide I.
 
 
 0.955
AGA85413.1
Hypothetical protein.
 
 
0.950
AGA85414.1
PFAM: Cytochrome D1 heme domain.
 
 
0.924
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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