STRINGSTRING
AGA85404.1 AGA85404.1 AGA85402.1 AGA85402.1 AGA85417.1 AGA85417.1 hemH hemH AGA85415.1 AGA85415.1 AGA85418.1 AGA85418.1 AGA85416.1 AGA85416.1 AGA85413.1 AGA85413.1 AGA85414.1 AGA85414.1 AGA85408.1 AGA85408.1 AGA85403.1 AGA85403.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AGA85404.1PFAM: Radical SAM superfamily; TIGRFAM: heme d1 biosynthesis radical SAM protein NirJ; radical SAM additional 4Fe4S-binding domain. (393 aa)    
Predicted Functional Partners:
AGA85402.1
Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c; Cytochrome D1 heme domain.
 
  
 0.956
AGA85417.1
Transcriptional regulator.
  
 0.924
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 
 0.916
AGA85415.1
Transcriptional regulator.
  
 0.901
AGA85418.1
Transcriptional regulator, AsnC family.
 
  
 0.899
AGA85416.1
Transcriptional regulator.
 
  
 0.895
AGA85413.1
Hypothetical protein.
 
  
 0.890
AGA85414.1
PFAM: Cytochrome D1 heme domain.
 
  
 0.890
AGA85408.1
Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c; Cytochrome D1 heme domain.
 
  
 0.860
AGA85403.1
uroporphyrinogen-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.797
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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