STRINGSTRING
AGA85519.1 AGA85519.1 AGA85518.1 AGA85518.1 AGA85521.1 AGA85521.1 AGA85520.1 AGA85520.1 AGA85522.1 AGA85522.1 AGA86176.1 AGA86176.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA85519.1ABC-type uncharacterized transport system, permease component; PFAM: High-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family. (373 aa)    
Predicted Functional Partners:
AGA85518.1
Hypothetical protein; PFAM: Uncharacterised BCR, COG1937.
 
   
 0.852
AGA85521.1
PFAM: TraX protein.
       0.789
AGA85520.1
Putative membrane protein; PFAM: SNARE associated Golgi protein.
       0.785
AGA85522.1
Hypothetical protein.
       0.526
AGA86176.1
Putative integral membrane protein.
 
   
 0.418
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.