STRINGSTRING
AGA85736.1 AGA85736.1 AGA86709.1 AGA86709.1 AGA87602.1 AGA87602.1 AGA87381.1 AGA87381.1 AGA88782.1 AGA88782.1 AGA86693.1 AGA86693.1 AGA86695.1 AGA86695.1 AGA84821.1 AGA84821.1 rplY rplY AGA85737.1 AGA85737.1 AGA87533.1 AGA87533.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA85736.1PFAM: Stress-induced bacterial acidophilic repeat motif. (56 aa)    
Predicted Functional Partners:
AGA86709.1
Hypothetical protein; PFAM: Domain of unknown function (DUF892).
 
  
 0.929
AGA87602.1
Putative outer membrane protein.
  
  
 0.669
AGA87381.1
Hypothetical protein; PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
   
  
 0.662
AGA88782.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.625
AGA86693.1
Putative integral membrane protein; PFAM: Uncharacterised protein family (UPF0104).
  
     0.603
AGA86695.1
Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
  
    0.496
AGA84821.1
Na/Pi-cotransporter; PFAM: PhoU domain; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter; Phosphate:Na+ Symporter (PNaS) Family.
  
     0.459
rplY
LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
   
  
 0.440
AGA85737.1
Hypothetical protein.
       0.428
AGA87533.1
PFAM: Protein of unknown function (DUF1282).
  
     0.421
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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