STRINGSTRING
AGA85845.1 AGA85845.1 AGA88542.1 AGA88542.1 AGA86373.1 AGA86373.1 AGA85846.1 AGA85846.1 hemF hemF AGA87697.1 AGA87697.1 AGA87838.1 AGA87838.1 AGA85844.1 AGA85844.1 xseA xseA AGA86650.1 AGA86650.1 AGA88806.1 AGA88806.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGA85845.1Nicotinamidase-like amidase; PFAM: Isochorismatase family. (180 aa)    
Predicted Functional Partners:
AGA88542.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme.
  
  
 0.935
AGA86373.1
Phosphopantetheinyl transferase component of siderophore synthetase; PFAM: 4'-phosphopantetheinyl transferase superfamily; Belongs to the P-Pant transferase superfamily.
  
  
 0.734
AGA85846.1
Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23.
  
    0.716
hemF
Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
 
      0.677
AGA87697.1
PFAM: Flavodoxin.
   
    0.577
AGA87838.1
Putative iron-regulated protein; PFAM: 2OG-Fe(II) oxygenase superfamily.
   
    0.568
AGA85844.1
PFAM: Mechanosensitive ion channel.
       0.558
xseA
Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.482
AGA86650.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor.
   
    0.478
AGA88806.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor.
   
    0.478
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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