node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA85226.1 | AGA88568.1 | Psest_0627 | Psest_4098 | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase. | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II. | 0.900 |
AGA85226.1 | polA | Psest_0627 | Psest_4219 | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.639 |
AGA85226.1 | recA | Psest_0627 | Psest_2872 | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.709 |
AGA85226.1 | uvrB | Psest_0627 | Psest_1296 | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.669 |
AGA85226.1 | uvrC | Psest_0627 | Psest_2259 | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.493 |
AGA85485.1 | AGA88568.1 | Psest_0899 | Psest_4098 | Excinuclease ATPase subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit. | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II. | 0.558 |
AGA85485.1 | polA | Psest_0899 | Psest_4219 | Excinuclease ATPase subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.495 |
AGA85485.1 | recA | Psest_0899 | Psest_2872 | Excinuclease ATPase subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.617 |
AGA85485.1 | recR | Psest_0899 | Psest_2545 | Excinuclease ATPase subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit. | DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.417 |
AGA85485.1 | rep | Psest_0899 | Psest_3778 | Excinuclease ATPase subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit. | ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. | 0.539 |
AGA85485.1 | uvrA | Psest_0899 | Psest_3576 | Excinuclease ATPase subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.912 |
AGA85485.1 | uvrB | Psest_0899 | Psest_1296 | Excinuclease ATPase subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.992 |
AGA85485.1 | uvrC | Psest_0899 | Psest_2259 | Excinuclease ATPase subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.829 |
AGA86932.1 | polA | Psest_2410 | Psest_4219 | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.639 |
AGA86932.1 | recA | Psest_2410 | Psest_2872 | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.777 |
AGA86932.1 | uvrB | Psest_2410 | Psest_1296 | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.683 |
AGA86932.1 | uvrC | Psest_2410 | Psest_2259 | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.585 |
AGA88568.1 | AGA85226.1 | Psest_4098 | Psest_0627 | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II. | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase. | 0.900 |
AGA88568.1 | AGA85485.1 | Psest_4098 | Psest_0899 | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II. | Excinuclease ATPase subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit. | 0.558 |
AGA88568.1 | polA | Psest_4098 | Psest_4219 | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.696 |