Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA85900.1 | AGA85901.1 | Psest_1342 | Psest_1343 | PFAM: Protein kinase domain. | Serine/threonine protein phosphatase; PFAM: Stage II sporulation protein E (SpoIIE). | 0.972 |
AGA85900.1 | AGA85902.1 | Psest_1342 | Psest_1344 | PFAM: Protein kinase domain. | PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.426 |
AGA85900.1 | AGA85903.1 | Psest_1342 | Psest_1345 | PFAM: Protein kinase domain. | FAD-dependent dehydrogenase; PFAM: FAD dependent oxidoreductase. | 0.408 |
AGA85901.1 | AGA85900.1 | Psest_1343 | Psest_1342 | Serine/threonine protein phosphatase; PFAM: Stage II sporulation protein E (SpoIIE). | PFAM: Protein kinase domain. | 0.972 |
AGA85901.1 | AGA85902.1 | Psest_1343 | Psest_1344 | Serine/threonine protein phosphatase; PFAM: Stage II sporulation protein E (SpoIIE). | PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.437 |
AGA85901.1 | AGA85903.1 | Psest_1343 | Psest_1345 | Serine/threonine protein phosphatase; PFAM: Stage II sporulation protein E (SpoIIE). | FAD-dependent dehydrogenase; PFAM: FAD dependent oxidoreductase. | 0.425 |
AGA85902.1 | AGA85900.1 | Psest_1344 | Psest_1342 | PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | PFAM: Protein kinase domain. | 0.426 |
AGA85902.1 | AGA85901.1 | Psest_1344 | Psest_1343 | PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Serine/threonine protein phosphatase; PFAM: Stage II sporulation protein E (SpoIIE). | 0.437 |
AGA85902.1 | AGA85903.1 | Psest_1344 | Psest_1345 | PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | FAD-dependent dehydrogenase; PFAM: FAD dependent oxidoreductase. | 0.787 |
AGA85902.1 | rlmE | Psest_1344 | Psest_1346 | PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 23S rRNA methylase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.673 |
AGA85903.1 | AGA85900.1 | Psest_1345 | Psest_1342 | FAD-dependent dehydrogenase; PFAM: FAD dependent oxidoreductase. | PFAM: Protein kinase domain. | 0.408 |
AGA85903.1 | AGA85901.1 | Psest_1345 | Psest_1343 | FAD-dependent dehydrogenase; PFAM: FAD dependent oxidoreductase. | Serine/threonine protein phosphatase; PFAM: Stage II sporulation protein E (SpoIIE). | 0.425 |
AGA85903.1 | AGA85902.1 | Psest_1345 | Psest_1344 | FAD-dependent dehydrogenase; PFAM: FAD dependent oxidoreductase. | PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.787 |
AGA85903.1 | rlmE | Psest_1345 | Psest_1346 | FAD-dependent dehydrogenase; PFAM: FAD dependent oxidoreductase. | 23S rRNA methylase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.514 |
rlmE | AGA85902.1 | Psest_1346 | Psest_1344 | 23S rRNA methylase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.673 |
rlmE | AGA85903.1 | Psest_1346 | Psest_1345 | 23S rRNA methylase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | FAD-dependent dehydrogenase; PFAM: FAD dependent oxidoreductase. | 0.514 |