STRINGSTRING
AGA85941.1 AGA85941.1 AGA87842.1 AGA87842.1 AGA85940.1 AGA85940.1 AGA86461.1 AGA86461.1 AGA85068.1 AGA85068.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA85941.1PFAM: Protein of unknown function (DUF3079). (70 aa)    
Predicted Functional Partners:
AGA87842.1
DnaK suppressor protein; PFAM: Prokaryotic dksA/traR C4-type zinc finger.
   
  
 0.585
AGA85940.1
PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid.
       0.501
AGA86461.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1853).
  
     0.462
AGA85068.1
PFAM: Glycosyltransferase family 25 (LPS biosynthesis protein).
  
     0.412
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.