STRINGSTRING
AGA85993.1 AGA85993.1 AGA85992.1 AGA85992.1 AGA85991.1 AGA85991.1 AGA85760.1 AGA85760.1 AGA85764.1 AGA85764.1 AGA85994.1 AGA85994.1 AGA85773.1 AGA85773.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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[Homology]
Score
AGA85993.1PFAM: Bacterial regulatory proteins, tetR family; YcdC-like protein, C-terminal region. (223 aa)    
Predicted Functional Partners:
AGA85992.1
PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
   
   0.794
AGA85991.1
PFAM: Protein of unknown function (DUF785).
       0.603
AGA85760.1
Putative membrane protein; PFAM: Cytochrome c; Protein of unknown function (DUF989).
 
     0.520
AGA85764.1
PFAM: Polysaccharide deacetylase; TIGRFAM: putative urate catabolism protein.
  
   
 0.500
AGA85994.1
Nucleoside-binding outer membrane protein; PFAM: Nucleoside-specific channel-forming protein, Tsx.
       0.441
AGA85773.1
Molybdenum cofactor sulfurylase; PFAM: XdhC and CoxI family; TIGRFAM: xanthine dehydrogenase accessory protein XdhC.
 
     0.427
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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