Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA86109.1 | AGA86110.1 | Psest_1559 | Psest_1560 | PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ. | Hypothetical protein. | 0.626 |
AGA86109.1 | AGA86111.1 | Psest_1559 | Psest_1561 | PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ. | PFAM: Protein of unknown function DUF72; manually curated; non-canonical start codon. | 0.612 |
AGA86109.1 | AGA86112.1 | Psest_1559 | Psest_1562 | PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ. | PFAM: Extensin-like protein C-terminus. | 0.428 |
AGA86109.1 | adk | Psest_1559 | Psest_1558 | PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ. | Adenylate kinase family protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.578 |
AGA86109.1 | rsmJ | Psest_1559 | Psest_1563 | PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ. | Protein of unknown function (DUF548); Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.426 |
AGA86110.1 | AGA86109.1 | Psest_1560 | Psest_1559 | Hypothetical protein. | PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ. | 0.626 |
AGA86110.1 | AGA86111.1 | Psest_1560 | Psest_1561 | Hypothetical protein. | PFAM: Protein of unknown function DUF72; manually curated; non-canonical start codon. | 0.778 |
AGA86110.1 | AGA86112.1 | Psest_1560 | Psest_1562 | Hypothetical protein. | PFAM: Extensin-like protein C-terminus. | 0.598 |
AGA86110.1 | adk | Psest_1560 | Psest_1558 | Hypothetical protein. | Adenylate kinase family protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.442 |
AGA86110.1 | rsmJ | Psest_1560 | Psest_1563 | Hypothetical protein. | Protein of unknown function (DUF548); Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.487 |
AGA86111.1 | AGA86109.1 | Psest_1561 | Psest_1559 | PFAM: Protein of unknown function DUF72; manually curated; non-canonical start codon. | PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ. | 0.612 |
AGA86111.1 | AGA86110.1 | Psest_1561 | Psest_1560 | PFAM: Protein of unknown function DUF72; manually curated; non-canonical start codon. | Hypothetical protein. | 0.778 |
AGA86111.1 | AGA86112.1 | Psest_1561 | Psest_1562 | PFAM: Protein of unknown function DUF72; manually curated; non-canonical start codon. | PFAM: Extensin-like protein C-terminus. | 0.611 |
AGA86111.1 | adk | Psest_1561 | Psest_1558 | PFAM: Protein of unknown function DUF72; manually curated; non-canonical start codon. | Adenylate kinase family protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.435 |
AGA86111.1 | rsmJ | Psest_1561 | Psest_1563 | PFAM: Protein of unknown function DUF72; manually curated; non-canonical start codon. | Protein of unknown function (DUF548); Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.497 |
AGA86112.1 | AGA86109.1 | Psest_1562 | Psest_1559 | PFAM: Extensin-like protein C-terminus. | PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ. | 0.428 |
AGA86112.1 | AGA86110.1 | Psest_1562 | Psest_1560 | PFAM: Extensin-like protein C-terminus. | Hypothetical protein. | 0.598 |
AGA86112.1 | AGA86111.1 | Psest_1562 | Psest_1561 | PFAM: Extensin-like protein C-terminus. | PFAM: Protein of unknown function DUF72; manually curated; non-canonical start codon. | 0.611 |
AGA86112.1 | rsmJ | Psest_1562 | Psest_1563 | PFAM: Extensin-like protein C-terminus. | Protein of unknown function (DUF548); Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.628 |
adk | AGA86109.1 | Psest_1558 | Psest_1559 | Adenylate kinase family protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ. | 0.578 |
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