STRINGSTRING
AGA86125.1 AGA86125.1 AGA86383.1 AGA86383.1 AGA87413.1 AGA87413.1 AGA85463.1 AGA85463.1 AGA88260.1 AGA88260.1 AGA86312.1 AGA86312.1 opgG opgG opgH opgH AGA86124.1 AGA86124.1 nagZ nagZ AGA87846.1 AGA87846.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AGA86125.1PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain. (763 aa)    
Predicted Functional Partners:
AGA86383.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.928
AGA87413.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5).
 
  
 0.928
AGA85463.1
Glycosidase; PFAM: Alpha amylase, catalytic domain.
   
 
 0.906
AGA88260.1
Glycosidase; PFAM: Alpha amylase, catalytic domain.
   
 
 0.906
AGA86312.1
Hypothetical protein.
  
  
 0.648
opgG
Periplasmic glucans biosynthesis protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
       0.546
opgH
Membrane glycosyltransferase; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
       0.532
AGA86124.1
PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family.
       0.524
nagZ
Beta-glucosidase-like glycosyl hydrolase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
  
   
 0.501
AGA87846.1
PFAM: Bacterial regulatory proteins, lacI family; family; TIGRFAM: D-fructose-responsive transcription factor.
 
   
 0.447
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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