Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA86109.1 | AGA86157.1 | Psest_1559 | Psest_1607 | PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ. | PFAM: Acetyltransferase (GNAT) family. | 0.416 |
AGA86109.1 | guaA | Psest_1559 | Psest_1287 | PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.449 |
AGA86156.1 | AGA86157.1 | Psest_1606 | Psest_1607 | Hypothetical protein. | PFAM: Acetyltransferase (GNAT) family. | 0.525 |
AGA86157.1 | AGA86109.1 | Psest_1607 | Psest_1559 | PFAM: Acetyltransferase (GNAT) family. | PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ. | 0.416 |
AGA86157.1 | AGA86156.1 | Psest_1607 | Psest_1606 | PFAM: Acetyltransferase (GNAT) family. | Hypothetical protein. | 0.525 |
AGA86157.1 | AGA87255.1 | Psest_1607 | Psest_2749 | PFAM: Acetyltransferase (GNAT) family. | Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | 0.432 |
AGA86157.1 | guaA | Psest_1607 | Psest_1287 | PFAM: Acetyltransferase (GNAT) family. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.429 |
AGA87255.1 | AGA86157.1 | Psest_2749 | Psest_1607 | Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix. | PFAM: Acetyltransferase (GNAT) family. | 0.432 |
guaA | AGA86109.1 | Psest_1287 | Psest_1559 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ. | 0.449 |
guaA | AGA86157.1 | Psest_1287 | Psest_1607 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | PFAM: Acetyltransferase (GNAT) family. | 0.429 |