STRINGSTRING
AGA86200.1 AGA86200.1 AGA87074.1 AGA87074.1 AGA86320.1 AGA86320.1 AGA86550.1 AGA86550.1 AGA88284.1 AGA88284.1 AGA87731.1 AGA87731.1 AGA85098.1 AGA85098.1 AGA85099.1 AGA85099.1 AGA84915.1 AGA84915.1 AGA87679.1 AGA87679.1 AGA85607.1 AGA85607.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA86200.1Hypothetical protein. (189 aa)    
Predicted Functional Partners:
AGA87074.1
Hypothetical protein.
  
     0.769
AGA86320.1
Hypothetical protein.
  
     0.762
AGA86550.1
Hypothetical protein.
 
     0.733
AGA88284.1
Hypothetical protein.
  
     0.726
AGA87731.1
Hypothetical protein.
  
     0.725
AGA85098.1
PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
  
    0.706
AGA85099.1
Hypothetical protein.
  
     0.681
AGA84915.1
Chemotaxis signal transduction protein; PFAM: CheW-like domain.
  
     0.655
AGA87679.1
Hypothetical protein.
 
     0.647
AGA85607.1
Hypothetical protein.
  
     0.644
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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