STRINGSTRING
AGA86336.1 AGA86336.1 AGA86335.1 AGA86335.1 AGA86333.1 AGA86333.1 AGA86334.1 AGA86334.1 AGA88542.1 AGA88542.1 AGA86330.1 AGA86330.1 lolD-2 lolD-2 ybeY ybeY truA truA AGA86338.1 AGA86338.1 AGA86339.1 AGA86339.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGA86336.1Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily. (287 aa)    
Predicted Functional Partners:
AGA86335.1
TIGR01244 family protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Putative phosphatase (DUF442); TIGRFAM: TIGR01244 family protein.
 
 
 0.931
AGA86333.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
 
 
 0.894
AGA86334.1
PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1.
     0.823
AGA88542.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme.
 
 
 
 0.508
AGA86330.1
Putative transporter component; PFAM: YeeE/YedE family (DUF395).
 
     0.496
lolD-2
ABC-type antimicrobial peptide transport system, ATPase component; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
  
 0.477
ybeY
Metalloprotein, YbeY/UPF0054 family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
 
 0.475
truA
Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.465
AGA86338.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
       0.459
AGA86339.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.459
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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