Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA84860.1 | AGA86353.1 | Psest_0249 | Psest_1807 | PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | PFAM: Chain length determinant protein. | 0.633 |
AGA84860.1 | AGA86355.1 | Psest_0249 | Psest_1809 | PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein. | 0.699 |
AGA84860.1 | AGA86357.1 | Psest_0249 | Psest_1811 | PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.811 |
AGA84860.1 | mraY | Psest_0249 | Psest_3262 | PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.611 |
AGA85710.1 | AGA86353.1 | Psest_1146 | Psest_1807 | PFAM: Protein of unknown function, DUF481. | PFAM: Chain length determinant protein. | 0.568 |
AGA85710.1 | AGA86903.1 | Psest_1146 | Psest_2381 | PFAM: Protein of unknown function, DUF481. | Hypothetical protein. | 0.537 |
AGA86353.1 | AGA84860.1 | Psest_1807 | Psest_0249 | PFAM: Chain length determinant protein. | PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.633 |
AGA86353.1 | AGA85710.1 | Psest_1807 | Psest_1146 | PFAM: Chain length determinant protein. | PFAM: Protein of unknown function, DUF481. | 0.568 |
AGA86353.1 | AGA86354.1 | Psest_1807 | Psest_1808 | PFAM: Chain length determinant protein. | PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain. | 0.518 |
AGA86353.1 | AGA86355.1 | Psest_1807 | Psest_1809 | PFAM: Chain length determinant protein. | Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein. | 0.570 |
AGA86353.1 | AGA86357.1 | Psest_1807 | Psest_1811 | PFAM: Chain length determinant protein. | PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.516 |
AGA86353.1 | AGA86903.1 | Psest_1807 | Psest_2381 | PFAM: Chain length determinant protein. | Hypothetical protein. | 0.485 |
AGA86353.1 | AGA87306.1 | Psest_1807 | Psest_2800 | PFAM: Chain length determinant protein. | Hypothetical protein. | 0.537 |
AGA86353.1 | AGA88054.1 | Psest_1807 | Psest_3565 | PFAM: Chain length determinant protein. | Hypothetical protein. | 0.482 |
AGA86353.1 | mraY | Psest_1807 | Psest_3262 | PFAM: Chain length determinant protein. | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.551 |
AGA86353.1 | rfaH | Psest_1807 | Psest_2605 | PFAM: Chain length determinant protein. | Transcriptional activator RfaH; Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components. Belongs to the RfaH family. | 0.668 |
AGA86354.1 | AGA86353.1 | Psest_1808 | Psest_1807 | PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain. | PFAM: Chain length determinant protein. | 0.518 |
AGA86354.1 | AGA86355.1 | Psest_1808 | Psest_1809 | PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain. | Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein. | 0.530 |
AGA86354.1 | AGA86357.1 | Psest_1808 | Psest_1811 | PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain. | PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.496 |
AGA86355.1 | AGA84860.1 | Psest_1809 | Psest_0249 | Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein. | PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.699 |
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