STRINGSTRING
gmd gmd fcl fcl AGA86367.1 AGA86367.1 AGA86366.1 AGA86366.1 AGA87669.1 AGA87669.1 AGA86386.1 AGA86386.1 AGA86370.1 AGA86370.1 AGA86368.1 AGA86368.1 AGA86369.1 AGA86369.1 AGA86356.1 AGA86356.1 AGA86371.1 AGA86371.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (372 aa)    
Predicted Functional Partners:
fcl
Nucleoside-diphosphate-sugar epimerase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 0.999
AGA86367.1
PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.990
AGA86366.1
ADP-ribose pyrophosphatase; PFAM: NUDIX domain.
 
  
 0.977
AGA87669.1
PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.965
AGA86386.1
PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.932
AGA86370.1
Glycosyl transferase possibly involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase.
  
  
 0.926
AGA86368.1
PFAM: Glycosyl transferase family 2.
 
  
 0.923
AGA86369.1
PFAM: NAD dependent epimerase/dehydratase family.
  
 
 0.865
AGA86356.1
PFAM: Polysaccharide biosynthesis protein; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase.
  
  
 0.864
AGA86371.1
Putative nucleoside-diphosphate sugar epimerase; PFAM: Polysaccharide biosynthesis protein.
  
  
 0.849
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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