Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA86452.1 | AGA86453.1 | Psest_1907 | Psest_1908 | Hypothetical protein. | Hypothetical protein. | 0.797 |
AGA86452.1 | AGA86454.1 | Psest_1907 | Psest_1909 | Hypothetical protein. | Phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase family. | 0.797 |
AGA86452.1 | mtnD | Psest_1907 | Psest_1905 | Hypothetical protein. | Hypothetical protein, contains double-stranded beta-helix domain; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. | 0.473 |
AGA86453.1 | AGA86452.1 | Psest_1908 | Psest_1907 | Hypothetical protein. | Hypothetical protein. | 0.797 |
AGA86453.1 | AGA86454.1 | Psest_1908 | Psest_1909 | Hypothetical protein. | Phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase family. | 0.775 |
AGA86453.1 | mtnD | Psest_1908 | Psest_1905 | Hypothetical protein. | Hypothetical protein, contains double-stranded beta-helix domain; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. | 0.440 |
AGA86454.1 | AGA86452.1 | Psest_1909 | Psest_1907 | Phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase family. | Hypothetical protein. | 0.797 |
AGA86454.1 | AGA86453.1 | Psest_1909 | Psest_1908 | Phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase family. | Hypothetical protein. | 0.775 |
AGA86454.1 | AGA87914.1 | Psest_1909 | Psest_3424 | Phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase family. | Putative membrane protein; PFAM: Uncharacterized protein family, UPF0114. | 0.574 |
AGA86454.1 | mtnD | Psest_1909 | Psest_1905 | Phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase family. | Hypothetical protein, contains double-stranded beta-helix domain; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. | 0.473 |
AGA87914.1 | AGA86454.1 | Psest_3424 | Psest_1909 | Putative membrane protein; PFAM: Uncharacterized protein family, UPF0114. | Phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase family. | 0.574 |
mtnD | AGA86452.1 | Psest_1905 | Psest_1907 | Hypothetical protein, contains double-stranded beta-helix domain; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. | Hypothetical protein. | 0.473 |
mtnD | AGA86453.1 | Psest_1905 | Psest_1908 | Hypothetical protein, contains double-stranded beta-helix domain; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. | Hypothetical protein. | 0.440 |
mtnD | AGA86454.1 | Psest_1905 | Psest_1909 | Hypothetical protein, contains double-stranded beta-helix domain; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. | Phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase family. | 0.473 |