STRINGSTRING
AGA86506.1 AGA86506.1 AGA87849.1 AGA87849.1 AGA88683.1 AGA88683.1 AGA87853.1 AGA87853.1 AGA87382.1 AGA87382.1 AGA88215.1 AGA88215.1 AGA86507.1 AGA86507.1 AGA86508.1 AGA86508.1 AGA85095.1 AGA85095.1 AGA86076.1 AGA86076.1 AGA87383.1 AGA87383.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA86506.1PFAM: Peptidase inhibitor I78 family. (102 aa)    
Predicted Functional Partners:
AGA87849.1
Hypothetical protein.
  
     0.694
AGA88683.1
Hypothetical protein.
  
     0.671
AGA87853.1
Hypothetical protein.
  
     0.641
AGA87382.1
PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
  
     0.568
AGA88215.1
PFAM: Mechanosensitive ion channel.
  
     0.522
AGA86507.1
Hypothetical protein.
       0.489
AGA86508.1
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain; PFAM: Peptidase C39 family; manually curated.
       0.489
AGA85095.1
Putative membrane protein affecting hemolysin expression; PFAM: HAMP domain; Bacterial virulence factor haemolysin.
  
     0.471
AGA86076.1
PFAM: Sel1 repeat.
  
     0.460
AGA87383.1
Putative deacetylase; PFAM: Uncharacterized protein conserved in bacteria (DUF2334).
  
     0.460
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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