STRINGSTRING
AGA86794.1 AGA86794.1 AGA86793.1 AGA86793.1 AGA86792.1 AGA86792.1 AGA85201.1 AGA85201.1 AGA85200.1 AGA85200.1 AGA85217.1 AGA85217.1 AGA85199.1 AGA85199.1 AGA85216.1 AGA85216.1 AGA88019.1 AGA88019.1 AGA85215.1 AGA85215.1 AGA86795.1 AGA86795.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA86794.1PFAM: Outer membrane efflux protein. (417 aa)    
Predicted Functional Partners:
AGA86793.1
PFAM: Copper binding periplasmic protein CusF; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.984
AGA86792.1
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.953
AGA85201.1
PFAM: Copper binding periplasmic protein CusF; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.933
AGA85200.1
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.803
AGA85217.1
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.744
AGA85199.1
PFAM: Copper binding periplasmic protein CusF.
 
 
 0.685
AGA85216.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Membrane Fusion Protein cluster 2 (function with RND porters); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.685
AGA88019.1
PFAM: Copper binding periplasmic protein CusF.
 
 
 0.656
AGA85215.1
PFAM: Outer membrane efflux protein.
  
   
 0.614
AGA86795.1
Hypothetical protein.
       0.587
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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