STRINGSTRING
AGA86836.1 AGA86836.1 tolB tolB AGA86837.1 AGA86837.1 AGA87338.1 AGA87338.1 AGA87047.1 AGA87047.1 AGA87050.1 AGA87050.1 AGA88626.1 AGA88626.1 AGA86838.1 AGA86838.1 AGA85976.1 AGA85976.1 AGA87592.1 AGA87592.1 AGA87787.1 AGA87787.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA86836.1Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OprF membrane domain; OmpA family. (330 aa)    
Predicted Functional Partners:
tolB
Tol-pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.810
AGA86837.1
PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
 
   
 0.724
AGA87338.1
PFAM: Outer membrane protein (OmpH-like).
 
 
 0.723
AGA87047.1
PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II.
  
   0.722
AGA87050.1
PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II.
  
   0.722
AGA88626.1
DNA-binding protein with winged-HTH domain; PFAM: Transcriptional regulatory protein, C terminal.
  
 
 0.720
AGA86838.1
PFAM: Mechanosensitive ion channel; Conserved TM helix.
 
   
 0.698
AGA85976.1
PFAM: Carbohydrate-selective porin, OprB family.
     
 0.677
AGA87592.1
Periplasmic serine protease, Do/DeqQ family; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; Belongs to the peptidase S1C family.
    
 
 0.646
AGA87787.1
PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; periplasmic serine pepetdase DegS.
    
 
 0.646
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.