STRINGSTRING
AGA87082.1 AGA87082.1 AGA87083.1 AGA87083.1 AGA85013.1 AGA85013.1 AGA85896.1 AGA85896.1 AGA87079.1 AGA87079.1 AGA87080.1 AGA87080.1 AGA87081.1 AGA87081.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA87082.1Zinc metalloprotease (elastase); Extracellular zinc metalloprotease. (347 aa)    
Predicted Functional Partners:
AGA87083.1
Hypothetical protein.
 
     0.919
AGA85013.1
Glycosyltransferase, MGT family; PFAM: UDP-glucoronosyl and UDP-glucosyl transferase; TIGRFAM: glycosyltransferase, MGT family; Belongs to the UDP-glycosyltransferase family.
  
    0.594
AGA85896.1
Putative aminopeptidase; PFAM: PA domain; Peptidase family M28.
 
  
 0.546
AGA87079.1
PFAM: Protein of unknown function (DUF2474).
       0.497
AGA87080.1
PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB).
       0.497
AGA87081.1
Cytochrome bd-type quinol oxidase, subunit 1; PFAM: Bacterial Cytochrome Ubiquinol Oxidase.
       0.497
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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