STRINGSTRING
AGA87192.1 AGA87192.1 AGA87193.1 AGA87193.1 AGA87194.1 AGA87194.1 AGA87196.1 AGA87196.1 AGA88120.1 AGA88120.1 AGA88542.1 AGA88542.1 AGA86919.1 AGA86919.1 AGA88729.1 AGA88729.1 AGA85728.1 AGA85728.1 infB infB AGA85605.1 AGA85605.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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[Homology]
Score
AGA87192.1ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter. (592 aa)    
Predicted Functional Partners:
AGA87193.1
Putative protein-disulfide isomerase; PFAM: DSBA-like thioredoxin domain.
 
    0.831
AGA87194.1
Putative sulfurtransferase; PFAM: Rhodanese-like domain; Belongs to the UPF0176 family.
       0.668
AGA87196.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2059).
 
     0.598
AGA88120.1
PFAM: ATPase family associated with various cellular activities (AAA).
   
 0.551
AGA88542.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme.
  
 
 0.549
AGA86919.1
PFAM: FAD binding domain of DNA photolyase; DNA photolyase.
    
 
 0.540
AGA88729.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter; ABC-2 type transporter.
  
0.517
AGA85728.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 
 0.513
infB
Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
    
 
 0.495
AGA85605.1
Hypothetical protein.
  
     0.495
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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