STRINGSTRING
AGA87200.1 AGA87200.1 AGA87202.1 AGA87202.1 AGA87199.1 AGA87199.1 AGA87201.1 AGA87201.1 AGA87207.1 AGA87207.1 AGA87206.1 AGA87206.1 AGA87203.1 AGA87203.1 AGA87208.1 AGA87208.1 AGA87205.1 AGA87205.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGA87200.1PFAM: Benzoate membrane transport protein; TIGRFAM: benzoate transporter. (401 aa)    
Predicted Functional Partners:
AGA87202.1
PFAM: Muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase.
 
   
 0.681
AGA87199.1
PFAM: outer membrane porin, OprD family.
 
   
 0.665
AGA87201.1
Catechol 1,2-dioxygenase, proteobacterial; PFAM: Dioxygenase; Catechol dioxygenase N terminus; TIGRFAM: catechol 1,2-dioxygenase, proteobacterial.
 
   
 0.655
AGA87207.1
PFAM: Ring hydroxylating beta subunit; TIGRFAM: benzoate 1,2-dioxygenase, small subunit.
 
   
 0.596
AGA87206.1
2-polyprenylphenol hydroxylase-like oxidoreductase; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain.
 
   
 0.585
AGA87203.1
Muconate/chloromuconate cycloisomerase; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: muconate and chloromuconate cycloisomerases.
 
   
 0.581
AGA87208.1
Benzoate 1,2-dioxygenase, large subunit; PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain; TIGRFAM: benzoate 1,2-dioxygenase, large subunit.
 
   
 0.529
AGA87205.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.493
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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