STRINGSTRING
AGA87360.1 AGA87360.1 dinG dinG AGA87359.1 AGA87359.1 AGA85076.1 AGA85076.1 AGA85080.1 AGA85080.1 AGA87362.1 AGA87362.1 AGA85690.1 AGA85690.1 AGA85094.1 AGA85094.1 AGA85278.1 AGA85278.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA87360.1Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase. (382 aa)    
Predicted Functional Partners:
dinG
DNA helicase, Rad3; DNA-dependent ATPase and 5'-3' DNA helicase.
 
   
 0.621
AGA87359.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
       0.542
AGA85076.1
Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase.
 
     0.510
AGA85080.1
Glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase.
  
     0.444
AGA87362.1
Putative integral membrane protein; PFAM: Copper resistance protein D.
       0.443
AGA85690.1
PFAM: YebG protein.
  
     0.424
AGA85094.1
PFAM: Protein of unknown function (DUF330).
  
     0.417
AGA85278.1
PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; LysM domain.
     
 0.411
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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