STRINGSTRING
AGA87407.1 AGA87407.1 AGA87406.1 AGA87406.1 AGA87408.1 AGA87408.1 AGA87409.1 AGA87409.1 AGA87139.1 AGA87139.1 AGA87405.1 AGA87405.1 AGA87402.1 AGA87402.1 AGA87403.1 AGA87403.1 AGA87404.1 AGA87404.1 AGA87137.1 AGA87137.1 AGA88591.1 AGA88591.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA87407.1Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family. (332 aa)    
Predicted Functional Partners:
AGA87406.1
Hypothetical protein.
  
  
 0.814
AGA87408.1
Hypothetical protein.
       0.610
AGA87409.1
Protein involved in cell division; PFAM: Fic/DOC family.
       0.610
AGA87139.1
Flp pilus assembly protein TadG.
  
     0.593
AGA87405.1
Hypothetical protein.
       0.576
AGA87402.1
Hypothetical protein; TIGRFAM: DNA binding domain, excisionase family.
       0.560
AGA87403.1
Hypothetical protein.
       0.557
AGA87404.1
Hypothetical protein.
       0.557
AGA87137.1
PFAM: TadE-like protein.
  
     0.517
AGA88591.1
PFAM: Zonular occludens toxin (Zot).
 
  
 0.502
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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