STRINGSTRING
AGA87525.1 AGA87525.1 AGA87524.1 AGA87524.1 AGA87523.1 AGA87523.1 AGA87521.1 AGA87521.1 AGA87522.1 AGA87522.1 AGA87520.1 AGA87520.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA87525.1Hypothetical protein. (59 aa)    
Predicted Functional Partners:
AGA87524.1
Cytochrome bd-type quinol oxidase, subunit 1; PFAM: Bacterial Cytochrome Ubiquinol Oxidase.
       0.773
AGA87523.1
PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB).
       0.768
AGA87521.1
Putative membrane protein; PFAM: Cyd operon protein YbgE (Cyd_oper_YbgE); TIGRFAM: cyd operon protein YbgE.
       0.618
AGA87522.1
PFAM: Membrane bound YbgT-like protein; TIGRFAM: cyd operon protein YbgT.
       0.618
AGA87520.1
NAD-dependent protein deacetylase, SIR2 family; PFAM: Sir2 family.
       0.404
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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