STRINGSTRING
AGA87704.1 AGA87704.1 AGA87705.1 AGA87705.1 AGA86254.1 AGA86254.1 AGA87706.1 AGA87706.1 AGA87974.1 AGA87974.1 AGA86255.1 AGA86255.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA87704.1PFAM: NADH:flavin oxidoreductase / NADH oxidase family. (369 aa)    
Predicted Functional Partners:
AGA87705.1
PFAM: Bacterial regulatory proteins, tetR family.
  
  
 0.789
AGA86254.1
Electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein domain.
  
 
 0.574
AGA87706.1
PFAM: Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.522
AGA87974.1
TIGRFAM: nitrate reductase, beta subunit.
    
   0.478
AGA86255.1
Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
   
 
 0.469
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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