STRINGSTRING
AGA87742.1 AGA87742.1 AGA87743.1 AGA87743.1 AGA87741.1 AGA87741.1 AGA87744.1 AGA87744.1 AGA86178.1 AGA86178.1 AGA87739.1 AGA87739.1 AGA87602.1 AGA87602.1 AGA87288.1 AGA87288.1 AGA88454.1 AGA88454.1 AGA86195.1 AGA86195.1 AGA87323.1 AGA87323.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA87742.1PFAM: Rho termination factor, N-terminal domain. (132 aa)    
Predicted Functional Partners:
AGA87743.1
Hypothetical protein.
       0.762
AGA87741.1
PFAM: SmpA / OmlA family.
  
    0.679
AGA87744.1
Bacterioferritin (cytochrome b1); PFAM: Ferritin-like domain.
  
    0.663
AGA86178.1
Hypothetical protein.
   
    0.537
AGA87739.1
Putative membrane protein; PFAM: MgtC family.
 
     0.530
AGA87602.1
Putative outer membrane protein.
 
    0.526
AGA87288.1
PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein.
  
     0.458
AGA88454.1
PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein.
  
     0.445
AGA86195.1
Hypothetical protein.
   
    0.408
AGA87323.1
Ribosome-associated protein Y (PSrp-1); PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein.
  
     0.406
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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