Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA86178.1 | AGA87742.1 | Psest_1628 | Psest_3250 | Hypothetical protein. | PFAM: Rho termination factor, N-terminal domain. | 0.537 |
AGA86195.1 | AGA87602.1 | Psest_1645 | Psest_3106 | Hypothetical protein. | Putative outer membrane protein. | 0.408 |
AGA86195.1 | AGA87742.1 | Psest_1645 | Psest_3250 | Hypothetical protein. | PFAM: Rho termination factor, N-terminal domain. | 0.408 |
AGA87288.1 | AGA87742.1 | Psest_2782 | Psest_3250 | PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein. | PFAM: Rho termination factor, N-terminal domain. | 0.458 |
AGA87323.1 | AGA87742.1 | Psest_2818 | Psest_3250 | Ribosome-associated protein Y (PSrp-1); PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein. | PFAM: Rho termination factor, N-terminal domain. | 0.406 |
AGA87602.1 | AGA86195.1 | Psest_3106 | Psest_1645 | Putative outer membrane protein. | Hypothetical protein. | 0.408 |
AGA87602.1 | AGA87742.1 | Psest_3106 | Psest_3250 | Putative outer membrane protein. | PFAM: Rho termination factor, N-terminal domain. | 0.526 |
AGA87739.1 | AGA87741.1 | Psest_3247 | Psest_3249 | Putative membrane protein; PFAM: MgtC family. | PFAM: SmpA / OmlA family. | 0.485 |
AGA87739.1 | AGA87742.1 | Psest_3247 | Psest_3250 | Putative membrane protein; PFAM: MgtC family. | PFAM: Rho termination factor, N-terminal domain. | 0.530 |
AGA87741.1 | AGA87739.1 | Psest_3249 | Psest_3247 | PFAM: SmpA / OmlA family. | Putative membrane protein; PFAM: MgtC family. | 0.485 |
AGA87741.1 | AGA87742.1 | Psest_3249 | Psest_3250 | PFAM: SmpA / OmlA family. | PFAM: Rho termination factor, N-terminal domain. | 0.679 |
AGA87741.1 | AGA87743.1 | Psest_3249 | Psest_3251 | PFAM: SmpA / OmlA family. | Hypothetical protein. | 0.586 |
AGA87741.1 | AGA87744.1 | Psest_3249 | Psest_3252 | PFAM: SmpA / OmlA family. | Bacterioferritin (cytochrome b1); PFAM: Ferritin-like domain. | 0.674 |
AGA87742.1 | AGA86178.1 | Psest_3250 | Psest_1628 | PFAM: Rho termination factor, N-terminal domain. | Hypothetical protein. | 0.537 |
AGA87742.1 | AGA86195.1 | Psest_3250 | Psest_1645 | PFAM: Rho termination factor, N-terminal domain. | Hypothetical protein. | 0.408 |
AGA87742.1 | AGA87288.1 | Psest_3250 | Psest_2782 | PFAM: Rho termination factor, N-terminal domain. | PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein. | 0.458 |
AGA87742.1 | AGA87323.1 | Psest_3250 | Psest_2818 | PFAM: Rho termination factor, N-terminal domain. | Ribosome-associated protein Y (PSrp-1); PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein. | 0.406 |
AGA87742.1 | AGA87602.1 | Psest_3250 | Psest_3106 | PFAM: Rho termination factor, N-terminal domain. | Putative outer membrane protein. | 0.526 |
AGA87742.1 | AGA87739.1 | Psest_3250 | Psest_3247 | PFAM: Rho termination factor, N-terminal domain. | Putative membrane protein; PFAM: MgtC family. | 0.530 |
AGA87742.1 | AGA87741.1 | Psest_3250 | Psest_3249 | PFAM: Rho termination factor, N-terminal domain. | PFAM: SmpA / OmlA family. | 0.679 |
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